BUSCO评估基因组

conda activate pfam_scan

-m genome

python3 /media/aa/DATA/JJH/software/busco/src/busco/run_BUSCO.py -i /media/aa/DATA/SZQ2/bj/a.preparing_data/genome_unmasked_fasta_data/20200808_3.genome.fasta -o 20200808_3.output -l /media/aa/DATA/JJH/software/busco/basidiomycota_odb10/ -m genome -c 40

-m proteins 

cd busco_out; busco -i ../protein_files/proteins.genome.gff3.fasta -c 8 -o genome.gff3 -m proteins -l /home/aa/anaconda3/envs/pfam_scan/databases/basidiomycota_odb10 --offline

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转载自blog.csdn.net/weixin_58269397/article/details/130970056