The method of quantitative images of various experiments

Scratch test

Use imageJ plug: Wound Healing Tool

download link

http://dev.mri.cnrs.fr/attachments/download/1992/MRI_Wound_Healing_Tool.ijm

installation method

Above file into the folder imageJ macros / toolsets, restart imagej.

Instructions

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The rightmost point double arrow

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Get this


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Open a picture, left-click m can be measured directly, right-click to open the m parameter settings


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The results are as follows
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Click on the corresponding region number, a recording area on it (this is FIG. 2).

migration

Reference: http://www.sohu.com/a/240069404_650214

Quantitative process

Open a picture
shown in FIG, image-type-8-bit


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image-adjust-threshold adjust the threshold value, the black cells of choice, there may be little cell behind can be screened out, click Apply.


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Linked cell division
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count
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The adjustment to the parameters here


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The results are as follows:
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Angiogenesis

use tools

Angiogenesis Analyzer
http://image.bio.methods.free.fr/ImageJ/?Angiogenesis-Analyzer-for-ImageJ#outil_sommaire_0
下载地址
http://rsb.info.nih.gov/ij/macros/toolsets/Angiogenesis%20Analyzer.txt

installation method

Under the plug-in to download imagej folder / macros / toolset, the restart imagej.

Quantitative process

Open a picture, open Angiogenesis Analyzer


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Direct quantitative


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Change parameters
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Quantitative CD31 blood vessels

Quantitative process

Open a picture
image-> Color-> Split Channels


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FIG obtain the following three (red, green and blue channels)


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This figure CD31 dyed red, the red channel can be retained.
Then image-> Adjust-> Threshold, hook Dark background, adjusted to the appropriate threshold point Apply
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Analyze-> Set Measurements, the following options on the hook


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Analyze-> Measure can be.
After the calculation of the results:
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Reproduced in: https: //www.jianshu.com/p/f56ddab884ac

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Origin blog.csdn.net/weixin_33759269/article/details/91315106