Circos Drawing - Basic

Before seen a picture on population migration, the feeling is amazing, Circos later learned that this tool, although mainly used to draw graphs chromosome genome, but in other respects also has a good visual effect

User behavior car transaction tracking

How do customers "flow" between brands and car segments?

 

 City planning

 

 Human migration patterns

 

 Political debate

 

 Visualization page 1 draw

http://mkweb.bcgsc.ca/tableviewer/     ready for its standard txt file, upload visualization, simpler

 Upload txt file format :( Reference: http://mkweb.bcgsc.ca/tableviewer/samples/ )

 

 

 

 2 code draws

You can customize more of things 

1. Install circos with Perl

To be able to run circos, need to install Perl, it is an interpreted language, we do not understand the language

Windows users should download  Strawberry Perl  or  ActiveState Perl .

Further details can be downloaded in  Perl and Modules section  to understand the

 circos no user interface, all operations are performed at the command line, run on UNIX and Windows systems can

In order to verify installed:

Download Circos  http://circos.ca/software/download/

 

Select the latest version can be downloaded directly extract

 

 

 Windows users need to run perl, then use the script as a parameter circos

2. Run circos

And then run the perl script file as a parameter Circos, and command line together

在命令行将目录设为circos下载的目录

perl bin\circos -modules  # 检查perl模块是都有缺失

 

未完待续.......

参考:

http://circos.ca/intro/general_data/  多种领域应用

http://mkweb.bcgsc.ca/tableviewer/samples/ 案例图

http://www.circos.ca/software/download/circos/ 主页下载

http://genomevisualization.com/documentation/tutorials/configuration/distribution_and_installation/ 安装运行

 http://genomevisualization.com/documentation/tutorials/configuration/runtime_parameters/

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Origin www.cnblogs.com/icydengyw/p/12310060.html