Contents
p2 QA #1_ Check your newly created NIfTI files
p2 QA #1_ Check your newly created NIfTI files
1. The sample data hierarchy
subjects(?)/subXXX/
/BOLD/
/ QA
/taskXXX_runXXX/bold.nii.gz
/anatomy
/behav
/model/modelXXX/onsets/taskXXX_runXXX/conXXX.txt
(https://www.bilibili.com/video/av61429264?p=2,04:40, 08:02, 08:55)
2. FIG supra, run in a txt file with a different set of different conditions / irritation / Comparative (Contrasts)
3. Before beginning treatment points to be checked
(https://www.bilibili.com/video/av61429264?p=2,18:12)
*[0-9] to list all numbers @ this position. i.e., ls cond00[0-9].txt to list cond001.txt cond002.txt cond003.txt ... cond009.txt, if any of them exist.
**dim4 listed with fslinfo represents # of volumes
***fslview T1.nii.gz works well to show orientation labels (exactly resemble the following pic)
(https://www.bilibili.com/video/av61429264?p=2, 16:01)
tbc